Gerald,
The Board Revision Changes for revision A6 show resistor R220 being added as pull-down to the nInt pin.
I applied this patch to my patched A3 board that would only boot at 10 Mbps, and voila, now it works again at all speeds.
And it also lights the yellow LED at 100 Mbps.
Q: Where did the information for this patch come from, as it's not in any of the datasheets or AN's I could find.
Cheers,
-- Bas